SubtiBank SubtiBank
Version comparison:

2018-02-16 18:01:512025-05-25 04:48:45

description

class B penicillin-binding protein H, required for [SW|cell wall synthesis ]during cell elongation

class B penicillin-binding protein H, required for [SW|cell wall synthesis] during cell elongation, part of the [[protein|Rod complex]] for lateral [SW|cell wall synthesis] and control of cell diameter

locus

BSU13980

BSU_13980

geneLength

2055

2058

outlinks

bsu

BSU13980

BSU_13980

Gene

Coordinates

1,467,805 → 1,469,862

1,467,805 1,469,862

The protein

Protein family

transpeptidase family (according to Swiss-Prot)

[SW|transpeptidase family] (according to UniProt)

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

localization depends on the availability of peptidoglyan precursors (lipid II) [Pubmed|23895585]

during vegetative growth: evenly distributed along the membrane [pubmed|14731276]

localization depends on the availability of peptidoglyan precursors (lipid II) [Pubmed|23895585]

Biological materials

Mutant

MGNA-B335 (ykuA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1334 NBRP B. subtilis, Japan]

BKE13980 (Δ[[gene|pbpH]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATTGCTCTGTTTC, downstream forward: _UP4_TAAAAAACAGGGTGCACAAC

BKK13980 (Δ[[gene|pbpH]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATTGCTCTGTTTC, downstream forward: _UP4_TAAAAAACAGGGTGCACAAC

MGNA-B335 (ykuA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1334 NBRP B. subtilis, Japan]

BKE13980 ([[gene|pbpH]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATTGCTCTGTTTC, downstream forward: _UP4_TAAAAAACAGGGTGCACAAC

BKK13980 ([[gene|pbpH]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13980 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATTGCTCTGTTTC, downstream forward: _UP4_TAAAAAACAGGGTGCACAAC

References

12896990, 20525796, 21636744, 21636745, 20817675, 23199363, 23895585, 14731276, 19233207

12896990, 20525796, 21636744, 21636745, 20817675, 23199363, 23895585, 14731276, 19233207, 31086310, 32973704